CDS
| Accession Number | TCMCG017C13947 |
| gbkey | CDS |
| Protein Id | OMO95432.1 |
| Location | join(14393..14408,14503..14779,15458..15582,15784..15871,16000..16135,16245..16544,16788..17004,17293..17396,17574..17720) |
| GeneID | InterPro:IPR021715 |
| Organism | Corchorus olitorius |
| locus_tag | COLO4_15877 |
Protein
| Length | 469aa |
| Molecule type | protein |
| Topology | linear |
| Data_file_division | PLN |
| dblink | BioProject:PRJNA215141, BioSample:SAMN03160584 |
| db_source | AWUE01015837.1 |
| Definition | Pre-mRNA splicing Prp18-interacting factor [Corchorus olitorius] |
| Locus_tag | COLO4_15877 |
EGGNOG-MAPPER Annotation
| COG_category | A |
| Description | pre-mRNA-splicing factor |
| KEGG_TC | - |
| KEGG_Module | - |
| KEGG_Reaction | - |
| KEGG_rclass | - |
| BRITE |
ko00000
[VIEW IN KEGG] ko00001 [VIEW IN KEGG] ko03041 [VIEW IN KEGG] |
| KEGG_ko |
ko:K12819
[VIEW IN KEGG] |
| EC | - |
| KEGG_Pathway |
ko03040
[VIEW IN KEGG] map03040 [VIEW IN KEGG] |
| GOs |
GO:0005575
[VIEW IN EMBL-EBI] GO:0005622 [VIEW IN EMBL-EBI] GO:0005623 [VIEW IN EMBL-EBI] GO:0005634 [VIEW IN EMBL-EBI] GO:0005681 [VIEW IN EMBL-EBI] GO:0032991 [VIEW IN EMBL-EBI] GO:0043226 [VIEW IN EMBL-EBI] GO:0043227 [VIEW IN EMBL-EBI] GO:0043229 [VIEW IN EMBL-EBI] GO:0043231 [VIEW IN EMBL-EBI] GO:0044422 [VIEW IN EMBL-EBI] GO:0044424 [VIEW IN EMBL-EBI] GO:0044428 [VIEW IN EMBL-EBI] GO:0044446 [VIEW IN EMBL-EBI] GO:0044464 [VIEW IN EMBL-EBI] GO:1990904 [VIEW IN EMBL-EBI] |
Sequence
| CDS: ATGGCTACCGCATCAGTGGCATTTAAATCGAGGGAGGATCACCGGAAACAGCTAGAATTAGAAGAAGCTCGAAAAGCAGGACTTGCGCCGGCTGAAGTCGATGAGGATGGAAAAGAGATTAACCCTCACATTCCTCAGTATATGTCATCAGCACCATGGTATCTCAATGCCGAAAGACCCAGTTTAAAGCATCAAAGGAAATGGAAGTCGGATCCAAATTACACCAAATCGTGGTATGATAGAGGTGCAAAGATCTTTCAGGCGGATAAGTATCGAAAGGGAGCCTGCGAAAACTGTGGAGCCATGACACATGATTCGAAGTCGTGCATGGAGAGGCCTCGTAAGAAGGGGGCAAAGTGGACAAGCATGCACATTGCACCTGATGAAAAGATAGAGACTTTTGAATTAGATTATGATGCTAAGGTCGATGAGAGCAAACAGATGGACTTTGCTAAGGTCGAGAAGCGTGTTCGTACTACTGGTGGAGGGAGCACGGGTACTGTAAGAAATCTGCGTATTCGGGAAGACACTGCCAAATATCTTTTGAATCTGGATGTGAATTCTGCATACTATGACCCCAAGACTCGATCTATGCGTGAAGATCCACTTCCGGATGCTGATCCAAATGAAAAGTTCTATGGAGGTGATAACCAATATAGAATGAGTGGGCAAGCTTTAGAGTTCAAGCAGCTGAATGTTCATGCATGGGAAGCATTTGATAAGGGTCAAGACATTCACATGCAAGCTGCTCCCTCTCAAGCTGAACTCCTTTTTAAGAATTTTAAGGTTAACAAAGAGAAATTGAGGACAAAGACCAAAGATACGATCATGGAGAAATATGGGAATGCAGCAACTGAAGAAGAGATACCAATGGAGCTTCTCCTAGGACAAAGTGAGAGGCAAGTCGAATATGATCGTGCTGGCAGAGTTATAAAAGGAATGGAAACATCCCTTCCAAAAAGCAAGTACGAAGAAGATGTTTTCATCAATAACCACACAACTGTTTGGGGTTCATGGTGGAATGATCACCAATGGGGATACAAGTGTTGTAAACAAACAATTCGGAATAGTTATTGTACTGGTGCGGCTGGTATTGAGGCTGCCGAAGCGGCAACAGACTTGATGAAGACTAACATTGCACGTAAAGCAGCCGCCAAAGATACCCCCGCTCCTGCGGAGGAGAGAAAGCTTGCTACTTGGGGAACTGAAGTTCCTGATGACCTGGTTCTTGATGAAAAACTTCTCTCTGAGGCTCTTAAGAAGGAGGATGAGAGGAAGAGAGTGGAGAAGGATGAACGAAAACGCAAGTACAATGTCAGATGGAATGATGAGGTTACGGCTGAGGATATGGAGGCATATCGGATGAAAAAGATACACCATGATGACCCCATGAAGGATTTCTTAAACTGA |
| Protein: MATASVAFKSREDHRKQLELEEARKAGLAPAEVDEDGKEINPHIPQYMSSAPWYLNAERPSLKHQRKWKSDPNYTKSWYDRGAKIFQADKYRKGACENCGAMTHDSKSCMERPRKKGAKWTSMHIAPDEKIETFELDYDAKVDESKQMDFAKVEKRVRTTGGGSTGTVRNLRIREDTAKYLLNLDVNSAYYDPKTRSMREDPLPDADPNEKFYGGDNQYRMSGQALEFKQLNVHAWEAFDKGQDIHMQAAPSQAELLFKNFKVNKEKLRTKTKDTIMEKYGNAATEEEIPMELLLGQSERQVEYDRAGRVIKGMETSLPKSKYEEDVFINNHTTVWGSWWNDHQWGYKCCKQTIRNSYCTGAAGIEAAEAATDLMKTNIARKAAAKDTPAPAEERKLATWGTEVPDDLVLDEKLLSEALKKEDERKRVEKDERKRKYNVRWNDEVTAEDMEAYRMKKIHHDDPMKDFLN |